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Although Escherichia coli is a universal gut commensal, it is also a major cause of extraintestinal disease, including urinary tract infections and bacteremia. Recently, a specific genetic sequence type, ST131, was identified as accounting for much of the fluoroquinolone-resistant (FQ-R) and extended-spectrum β-lactamase (ESBL)-producing E. coli in the world.
The Department of Veterans Affairs (VA) operates the largest integrated healthcare system in the U.S. Researchers (2 of whom have patent applications relating to diagnostic tests for ST131 and other E. coli lineages) hypothesized that ST131 — and especially its subclone H30, which contains a gene variant for fimbrial adhesin — was contributing to antibiotic resistance of E. coli among i…