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For diagnosing COVID-19, saliva sampling has two big advantages over nasopharyngeal (NP) swabbing: It is far less uncomfortable for patients, and it eliminates risky exposures for healthcare personnel who are collecting specimens. Small studies have suggested saliva tests have acceptable performance characteristics; now, larger studies are becoming available.
Yale researchers used a proprietary protocol to process saliva specimens from two high-prevalence populations. Among 70 inpatients with COVID-19 that was diagnosed by standard nasopharyngeal swabbing, sequential testing of self-collected saliva specimens performed similarly to repeat swab testing during hospitalization; in fact, saliva testing was somewhat less variable in quantitating RNA than were swabs. The authors also screened 495 asymptomatic healthcare workers with occupational COVID-19 exposures: 13 participants' saliva specimens tested positive for SARS-CoV-2. Of the 9 participants who also collected their own NP swabs, only 2 had positive swab tests. All 13 asymptomatic patients with positive saliva tests subsequently had COVID-19 confirmed by additional NP swabs.
Researchers in Canada used a different proprietary kit to analyze almost 2000 paired self-collected saliva and standard swab specimens obtained from asymptomatic or mildly symptomatic individuals with high clinical suspicion of COVID-19. Overall, 70 patients had positive tests: 34 were positive by both saliva and swab, 22 by swab alone, and 14 by saliva alone. Repeat sampling was not performed.
Wyllie AL et al. Saliva or nasopharyngeal swab specimens for detection of SARS-CoV-2. N Engl J Med 2020 Aug 28; [e-pub]. (https://doi.org/10.1056/NEJMc2016359)
Caulley L et al. Salivary detection of COVID-19. Ann Intern Med 2020 Aug 28; [e-pub]. (https://doi.org/10.7326/M20-4738)
Comment
These results suggest that, at least in high-prevalence populations, saliva analysis is not dramatically less sensitive than NP swab analysis and might even yield somewhat less variable results. Why the reliance on special kits and lab protocols for saliva testing? Because RNA is unstable in raw saliva and, if rapid transport to a lab is not possible, a variety of chemicals must be deployed immediately to keep the samples viable. The FDA just recently issued an Emergency Use Authorization for the protocol used by the Yale group, which is now branded (SalivaDirect) and available free of charge.